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CPT1B carnitine palmitoyltransferase 1B [ Gracilinanus agilis (Agile Gracile Mouse Opossum) ]

Gene ID: 123248821, updated on 22-Mar-2024

Summary

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Gene symbol
CPT1B
Gene description
carnitine palmitoyltransferase 1B
Gene type
protein coding
RefSeq status
MODEL
Organism
Gracilinanus agilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Gracilinanus
Orthologs
human mouse all
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Genomic context

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See CPT1B in Genome Data Viewer
Location:
chromosome: 5
Exon count:
19
Annotation release Status Assembly Chr Location
100 current AgileGrace (GCF_016433145.1) 5 NC_058134.1 (306477961..306489486, complement)

Chromosome 5 - NC_058134.1Genomic Context describing neighboring genes Neighboring gene ciliary microtubule associated protein 1B Neighboring gene synaptonemal complex central element protein 3 Neighboring gene mitogen-activated protein kinase 8 interacting protein 2 Neighboring gene arylsulfatase A Neighboring gene SH3 and multiple ankyrin repeat domains 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058134.1 Chromosome 5 Reference AgileGrace Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carnitine O-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carnitine O-palmitoyltransferase 1, muscle isoform

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gracilinanus agilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AgileGrace Primary Assembly

Genomic

  1. NC_058134.1 Reference AgileGrace Primary Assembly

    Range
    306477961..306489486 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044677700.1 → XP_044533635.1  carnitine O-palmitoyltransferase 1, muscle isoform isoform X1

  2. XM_044677701.1 → XP_044533636.1  carnitine O-palmitoyltransferase 1, muscle isoform isoform X2

Nucleotide Protein
Heading Accession and Version

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