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NAGA alpha-N-acetylgalactosaminidase [ Gracilinanus agilis (Agile Gracile Mouse Opossum) ]

Gene ID: 123248507, updated on 22-Mar-2024

Summary

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Gene symbol
NAGA
Gene description
alpha-N-acetylgalactosaminidase
Gene type
protein coding
RefSeq status
MODEL
Organism
Gracilinanus agilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Gracilinanus
Orthologs
human mouse all
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Genomic context

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See NAGA in Genome Data Viewer
Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
100 current AgileGrace (GCF_016433145.1) 5 NC_058134.1 (309099979..309104328)

Chromosome 5 - NC_058134.1Genomic Context describing neighboring genes Neighboring gene single-pass membrane protein with aspartate rich tail 1 Neighboring gene PH domain containing endocytic trafficking adaptor 2 Neighboring gene olfactory receptor 13H1-like Neighboring gene HAUS augmin-like complex subunit 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058134.1 Chromosome 5 Reference AgileGrace Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-galactosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycoside catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycosylceramide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-N-acetylgalactosaminidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gracilinanus agilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AgileGrace Primary Assembly

Genomic

  1. NC_058134.1 Reference AgileGrace Primary Assembly

    Range
    309099979..309104328
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044677298.1 → XP_044533233.1  alpha-N-acetylgalactosaminidase

    Conserved Domains (1) summary
    cl38930
    Location:24 → 308
    AmyAc_family; Alpha amylase catalytic domain family
Nucleotide Protein
Heading Accession and Version

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