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HS3ST5 heparan sulfate-glucosamine 3-sulfotransferase 5 [ Gracilinanus agilis (Agile Gracile Mouse Opossum) ]

Gene ID: 123247654, updated on 22-Mar-2024

Summary

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Gene symbol
HS3ST5
Gene description
heparan sulfate-glucosamine 3-sulfotransferase 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Gracilinanus agilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Gracilinanus
Orthologs
human mouse all
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Genomic context

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See HS3ST5 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
2
Annotation release Status Assembly Chr Location
100 current AgileGrace (GCF_016433145.1) 4 NC_058133.1 (366132356..366139045, complement)

Chromosome 4 - NC_058133.1Genomic Context describing neighboring genes Neighboring gene myristoylated alanine rich protein kinase C substrate Neighboring gene histone deacetylase 2 Neighboring gene rRNA-processing protein FCF1 homolog Neighboring gene fyn related Src family tyrosine kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058133.1 Chromosome 4 Reference AgileGrace Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gracilinanus agilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AgileGrace Primary Assembly

Genomic

  1. NC_058133.1 Reference AgileGrace Primary Assembly

    Range
    366132356..366139045 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044676610.1 → XP_044532545.1  heparan sulfate glucosamine 3-O-sulfotransferase 5

    Conserved Domains (1) summary
    pfam00685
    Location:89 → 329
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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