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PLCD4 phospholipase C delta 4 [ Gracilinanus agilis (Agile Gracile Mouse Opossum) ]

Gene ID: 123242735, updated on 22-Mar-2024

Summary

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Gene symbol
PLCD4
Gene description
phospholipase C delta 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Gracilinanus agilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Gracilinanus
Orthologs
human mouse all
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Genomic context

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See PLCD4 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
16
Annotation release Status Assembly Chr Location
100 current AgileGrace (GCF_016433145.1) 3 NC_058132.1 (615579058..615595851)

Chromosome 3 - NC_058132.1Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 37 Neighboring gene CCR4-NOT transcription complex subunit 9 Neighboring gene zinc finger protein 142 Neighboring gene serine/threonine kinase 36 Neighboring gene purine nucleoside phosphorylase-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058132.1 Chromosome 3 Reference AgileGrace Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gracilinanus agilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AgileGrace Primary Assembly

Genomic

  1. NC_058132.1 Reference AgileGrace Primary Assembly

    Range
    615579058..615595851
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044670753.1 → XP_044526688.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4

    Conserved Domains (4) summary
    PLN02952
    Location:237 → 785
    PLN02952; phosphoinositide phospholipase C
    cd00051
    Location:177 → 228
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    cd13363
    Location:48 → 163
    PH_PLC_delta; Phospholipase C-delta (PLC-delta) pleckstrin homology (PH) domain
    cl14615
    Location:319 → 631
    PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily
Nucleotide Protein
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