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PLEC plectin [ Gracilinanus agilis (Agile Gracile Mouse Opossum) ]

Gene ID: 123242117, updated on 22-Mar-2024

Summary

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Gene symbol
PLEC
Gene description
plectin
Gene type
protein coding
RefSeq status
MODEL
Organism
Gracilinanus agilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Gracilinanus
Orthologs
human mouse all
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Genomic context

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See PLEC in Genome Data Viewer
Location:
chromosome: 1
Exon count:
33
Annotation release Status Assembly Chr Location
100 current AgileGrace (GCF_016433145.1) 1 NC_058130.1 (705384799..705471194)

Chromosome 1 - NC_058130.1Genomic Context describing neighboring genes Neighboring gene glutamate ionotropic receptor NMDA type subunit associated protein 1 Neighboring gene poly(ADP-ribose) polymerase family member 10 Neighboring gene epiplakin 1 Neighboring gene uncharacterized LOC123232022

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058130.1 Chromosome 1 Reference AgileGrace Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables keratin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intermediate filament bundle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in wound healing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in keratin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
plectin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gracilinanus agilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AgileGrace Primary Assembly

Genomic

  1. NC_058130.1 Reference AgileGrace Primary Assembly

    Range
    705384799..705471194
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044669642.1 → XP_044525577.1  plectin

    Conserved Domains (6) summary
    PTZ00121
    Location:1490 → 2212
    PTZ00121; MAEBL; Provisional
    smart00250
    Location:4446 → 4483
    PLEC; Plectin repeat
    COG0419
    Location:1223 → 1697
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    COG5069
    Location:179 → 507
    SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
    cd00176
    Location:753 → 942
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl02102
    Location:5 → 117
    S10_plectin; Plectin/S10 domain
Nucleotide Protein
Heading Accession and Version

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