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NYX nyctalopin [ Gracilinanus agilis (Agile Gracile Mouse Opossum) ]

Gene ID: 123241624, updated on 22-Mar-2024

Summary

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Gene symbol
NYX
Gene description
nyctalopin
Gene type
protein coding
RefSeq status
MODEL
Organism
Gracilinanus agilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Gracilinanus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See NYX in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Annotation release Status Assembly Chr Location
100 current AgileGrace (GCF_016433145.1) 3 NC_058132.1 (401431768..401433183)

Chromosome 3 - NC_058132.1Genomic Context describing neighboring genes Neighboring gene adenylosuccinate synthetase isozyme 2-like Neighboring gene DEAD-box helicase 3 X-linked Neighboring gene calcium/calmodulin dependent serine protein kinase Neighboring gene G protein-coupled receptor 34 Neighboring gene G protein-coupled receptor 82

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058132.1 Chromosome 3 Reference AgileGrace Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nyctalopin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gracilinanus agilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AgileGrace Primary Assembly

Genomic

  1. NC_058132.1 Reference AgileGrace Primary Assembly

    Range
    401431768..401433183
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044669222.1 → XP_044525157.1  nyctalopin

    Conserved Domains (4) summary
    smart00013
    Location:21 → 50
    LRRNT; Leucine rich repeat N-terminal domain
    smart00082
    Location:325 → 358
    LRRCT; Leucine rich repeat C-terminal domain
    COG4886
    Location:56 → 309
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:57 → 76
    LRR_RI; leucine-rich repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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