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CHST7 carbohydrate sulfotransferase 7 [ Gracilinanus agilis (Agile Gracile Mouse Opossum) ]

Gene ID: 123239712, updated on 22-Mar-2024

Summary

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Gene symbol
CHST7
Gene description
carbohydrate sulfotransferase 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Gracilinanus agilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Gracilinanus
Orthologs
human mouse all
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Genomic context

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See CHST7 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Annotation release Status Assembly Chr Location
100 current AgileGrace (GCF_016433145.1) 3 NC_058132.1 (481222088..481258228, complement)

Chromosome 3 - NC_058132.1Genomic Context describing neighboring genes Neighboring gene RP2 activator of ARL3 GTPase Neighboring gene solute carrier family 9 member A7 Neighboring gene tubulin gamma complex component 5 Neighboring gene U6 spliceosomal RNA Neighboring gene cytoplasmic FMR1 interacting protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058132.1 Chromosome 3 Reference AgileGrace Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chondroitin 6-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gracilinanus agilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AgileGrace Primary Assembly

Genomic

  1. NC_058132.1 Reference AgileGrace Primary Assembly

    Range
    481222088..481258228 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044667003.1 → XP_044522938.1  carbohydrate sulfotransferase 7

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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