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SFTPC surfactant protein C [ Gracilinanus agilis (Agile Gracile Mouse Opossum) ]

Gene ID: 123236958, updated on 22-Mar-2024

Summary

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Gene symbol
SFTPC
Gene description
surfactant protein C
Gene type
protein coding
RefSeq status
MODEL
Organism
Gracilinanus agilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Gracilinanus
Orthologs
human mouse all
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Genomic context

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See SFTPC in Genome Data Viewer
Location:
chromosome: 2
Exon count:
7
Annotation release Status Assembly Chr Location
100 current AgileGrace (GCF_016433145.1) 2 NC_058131.1 (159819644..159881883, complement)

Chromosome 2 - NC_058131.1Genomic Context describing neighboring genes Neighboring gene phytanoyl-CoA 2-hydroxylase interacting protein Neighboring gene bone morphogenetic protein 1 Neighboring gene uncharacterized LOC123236959 Neighboring gene leucine rich repeat LGI family member 3 Neighboring gene receptor accessory protein 4 Neighboring gene HR upstream open reading frame Neighboring gene HR lysine demethylase and nuclear receptor corepressor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058131.1 Chromosome 2 Reference AgileGrace Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in respiratory gaseous exchange by respiratory system IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in alveolar lamellar body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pulmonary surfactant-associated protein C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gracilinanus agilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AgileGrace Primary Assembly

Genomic

  1. NC_058131.1 Reference AgileGrace Primary Assembly

    Range
    159819644..159881883 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044663494.1 → XP_044519429.1  pulmonary surfactant-associated protein C isoform X2

    Conserved Domains (1) summary
    smart00019
    Location:41 → 163
    SF_P; Pulmonary surfactant proteins

  2. XM_044663493.1 → XP_044519428.1  pulmonary surfactant-associated protein C isoform X1

    Conserved Domains (1) summary
    smart00019
    Location:1 → 193
    SF_P; Pulmonary surfactant proteins

  3. XM_044663495.1 → XP_044519430.1  pulmonary surfactant-associated protein C isoform X3

    Conserved Domains (1) summary
    smart00019
    Location:18 → 140
    SF_P; Pulmonary surfactant proteins
Nucleotide Protein
Heading Accession and Version

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