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LOC123234575 carbohydrate sulfotransferase 4-like [ Gracilinanus agilis (Agile Gracile Mouse Opossum) ]

Gene ID: 123234575, updated on 16-Nov-2023

Summary

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Gene symbol
LOC123234575
Gene description
carbohydrate sulfotransferase 4-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Gracilinanus agilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Gracilinanus
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Genomic context

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See LOC123234575 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Annotation release Status Assembly Chr Location
100 current AgileGrace (GCF_016433145.1) 2 NC_058131.1 (44018819..44019979)

Chromosome 2 - NC_058131.1Genomic Context describing neighboring genes Neighboring gene adenosine deaminase tRNA specific 1 Neighboring gene lysine--tRNA ligase Neighboring gene lysine--tRNA ligase-like Neighboring gene TERF2 interacting protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058131.1 Chromosome 2 Reference AgileGrace Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein sulfation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gracilinanus agilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AgileGrace Primary Assembly

Genomic

  1. NC_058131.1 Reference AgileGrace Primary Assembly

    Range
    44018819..44019979
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044660486.1 → XP_044516421.1  carbohydrate sulfotransferase 4-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases