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HEXB hexosaminidase subunit beta [ Gracilinanus agilis (Agile Gracile Mouse Opossum) ]

Gene ID: 123231436, updated on 22-Mar-2024

Summary

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Gene symbol
HEXB
Gene description
hexosaminidase subunit beta
Gene type
protein coding
RefSeq status
MODEL
Organism
Gracilinanus agilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Gracilinanus
Orthologs
human mouse all
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Genomic context

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See HEXB in Genome Data Viewer
Location:
chromosome: 1
Exon count:
14
Annotation release Status Assembly Chr Location
100 current AgileGrace (GCF_016433145.1) 1 NC_058130.1 (338558556..338598279)

Chromosome 1 - NC_058130.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene ectodermal-neural cortex 1 Neighboring gene GTP dependent ribosome recycling factor mitochondrial 2 Neighboring gene NSA2 ribosome biogenesis factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058130.1 Chromosome 1 Reference AgileGrace Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-N-acetylhexosaminidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ganglioside catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycosaminoglycan metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-hexosaminidase subunit beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gracilinanus agilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AgileGrace Primary Assembly

Genomic

  1. NC_058130.1 Reference AgileGrace Primary Assembly

    Range
    338558556..338598279
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044657693.1 → XP_044513628.1  beta-hexosaminidase subunit beta

    Conserved Domains (2) summary
    cd06562
    Location:186 → 524
    GH20_HexA_HexB-like; Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the ...
    pfam14845
    Location:42 → 164
    Glycohydro_20b2; beta-acetyl hexosaminidase like
Nucleotide Protein
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