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LFNG LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [ Gracilinanus agilis (Agile Gracile Mouse Opossum) ]

Gene ID: 123231173, updated on 22-Mar-2024

Summary

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Gene symbol
LFNG
Gene description
LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Gracilinanus agilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Gracilinanus
Orthologs
human mouse all
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Genomic context

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See LFNG in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
100 current AgileGrace (GCF_016433145.1) 1 NC_058130.1 (209647570..209676487, complement)

Chromosome 1 - NC_058130.1Genomic Context describing neighboring genes Neighboring gene IQ motif containing E Neighboring gene tweety family member 3 Neighboring gene QRFP-like peptide receptor Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058130.1 Chromosome 1 Reference AgileGrace Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pattern specification process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-N-acetylglucosaminyltransferase lunatic fringe

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gracilinanus agilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AgileGrace Primary Assembly

Genomic

  1. NC_058130.1 Reference AgileGrace Primary Assembly

    Range
    209647570..209676487 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044657422.1 → XP_044513357.1  beta-1,3-N-acetylglucosaminyltransferase lunatic fringe isoform X1

    Conserved Domains (1) summary
    pfam02434
    Location:137 → 383
    Fringe; Fringe-like

  2. XM_044657423.1 → XP_044513358.1  beta-1,3-N-acetylglucosaminyltransferase lunatic fringe isoform X2

    Conserved Domains (1) summary
    pfam02434
    Location:137 → 387
    Fringe; Fringe-like
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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