U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC123228876 dolichol-phosphate mannosyltransferase subunit 1 [ Mangifera indica (mango) ]

Gene ID: 123228876, updated on 30-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC123228876
Gene description
dolichol-phosphate mannosyltransferase subunit 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Mangifera indica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Anacardiaceae; Mangifera
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC123228876 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
9
Annotation release Status Assembly Chr Location
100 current CATAS_Mindica_2.1 (GCF_011075055.1) 11 NC_058147.1 (682016..684546, complement)

Chromosome 11 - NC_058147.1Genomic Context describing neighboring genes Neighboring gene probable flavin-containing monooxygenase 1 Neighboring gene uncharacterized LOC123228977 Neighboring gene 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic-like Neighboring gene small nuclear ribonucleoprotein SmD3b-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_058147.1 Chromosome 11 Reference CATAS_Mindica_2.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-phosphate beta-D-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dolichol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
dolichol-phosphate mannosyltransferase subunit 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Mangifera indica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CATAS_Mindica_2.1

Genomic

  1. NC_058147.1 Reference CATAS_Mindica_2.1

    Range
    682016..684546 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044654365.1 → XP_044510300.1  dolichol-phosphate mannosyltransferase subunit 1

    Conserved Domains (1) summary
    PLN02726
    Location:6 → 240
    PLN02726; dolichyl-phosphate beta-D-mannosyltransferase

  2. XM_044654366.1 → XP_044510301.1  dolichol-phosphate mannosyltransferase subunit 1

    Conserved Domains (1) summary
    PLN02726
    Location:6 → 240
    PLN02726; dolichyl-phosphate beta-D-mannosyltransferase

  3. XM_044654363.1 → XP_044510298.1  dolichol-phosphate mannosyltransferase subunit 1

    Conserved Domains (1) summary
    PLN02726
    Location:6 → 240
    PLN02726; dolichyl-phosphate beta-D-mannosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases