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LOC123228552 alpha-(1,4)-fucosyltransferase-like [ Mangifera indica (mango) ]

Gene ID: 123228552, updated on 30-Nov-2023

Summary

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Gene symbol
LOC123228552
Gene description
alpha-(1,4)-fucosyltransferase-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Mangifera indica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Anacardiaceae; Mangifera
Also known as
FUT13
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Genomic context

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See LOC123228552 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
3
Annotation release Status Assembly Chr Location
100 current CATAS_Mindica_2.1 (GCF_011075055.1) 11 NC_058147.1 (10009824..10013206)

Chromosome 11 - NC_058147.1Genomic Context describing neighboring genes Neighboring gene probable alkaline/neutral invertase D Neighboring gene uncharacterized LOC123230072 Neighboring gene tRNA nucleotidyltransferase cca2 Neighboring gene wax ester synthase/diacylglycerol acyltransferase 5-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058147.1 Chromosome 11 Reference CATAS_Mindica_2.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular cloning and functional expression of Lewis type α1,3/α1,4-fucosyltransferase cDNAs from Mangifera indica L. Okada T, et al. Phytochemistry, 2017 Dec. PMID 28910607
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-(1->3)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-(1,4)-fucosyltransferase-like
Names
alpha-1,3/alpha-1,4-fucosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mangifera indica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CATAS_Mindica_2.1

Genomic

  1. NC_058147.1 Reference CATAS_Mindica_2.1

    Range
    10009824..10013206
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044653956.1 → XP_044509891.1  alpha-(1,4)-fucosyltransferase-like

    UniProtKB/TrEMBL
    A0A292GKJ7
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases