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LOC123224169 alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase [ Mangifera indica (mango) ]

Gene ID: 123224169, updated on 30-Nov-2023

Summary

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Gene symbol
LOC123224169
Gene description
alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Mangifera indica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Anacardiaceae; Mangifera
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Genomic context

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See LOC123224169 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
2
Annotation release Status Assembly Chr Location
100 current CATAS_Mindica_2.1 (GCF_011075055.1) 8 NC_058144.1 (6239636..6241861)

Chromosome 8 - NC_058144.1Genomic Context describing neighboring genes Neighboring gene SNF1-related protein kinase regulatory subunit beta-2-like Neighboring gene uncharacterized LOC123223139 Neighboring gene uncharacterized LOC123224170 Neighboring gene putative protein FAR1-RELATED SEQUENCE 10 Neighboring gene transcriptional regulator STERILE APETALA-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058144.1 Chromosome 8 Reference CATAS_Mindica_2.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mango (Mangifera indica L.) germplasm diversity based on single nucleotide polymorphisms derived from the transcriptome. Sherman A, et al. BMC Plant Biol, 2015 Nov 14. PMID 26573148, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi stack IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mangifera indica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CATAS_Mindica_2.1

Genomic

  1. NC_058144.1 Reference CATAS_Mindica_2.1

    Range
    6239636..6241861
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044647740.1 → XP_044503675.1  alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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