U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC123221166 probable UDP-arabinopyranose mutase 5 [ Mangifera indica (mango) ]

Gene ID: 123221166, updated on 30-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC123221166
Gene description
probable UDP-arabinopyranose mutase 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Mangifera indica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Anacardiaceae; Mangifera
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC123221166 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
3
Annotation release Status Assembly Chr Location
100 current CATAS_Mindica_2.1 (GCF_011075055.1) 7 NC_058143.1 (12169254..12172857)

Chromosome 7 - NC_058143.1Genomic Context describing neighboring genes Neighboring gene FK506-binding protein 5-like Neighboring gene FK506-binding protein 5-like Neighboring gene uncharacterized LOC123220399 Neighboring gene uncharacterized LOC123219923 Neighboring gene sterol 3-beta-glucosyltransferase UGT80A2-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_058143.1 Chromosome 7 Reference CATAS_Mindica_2.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-arabinopyranose mutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-L-arabinose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
probable UDP-arabinopyranose mutase 5

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Mangifera indica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CATAS_Mindica_2.1

Genomic

  1. NC_058143.1 Reference CATAS_Mindica_2.1

    Range
    12169254..12172857
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044643906.1 → XP_044499841.1  probable UDP-arabinopyranose mutase 5 isoform X2

    Conserved Domains (1) summary
    pfam03214
    Location:84 → 422
    RGP; Reversibly glycosylated polypeptide

  2. XM_044643905.1 → XP_044499840.1  probable UDP-arabinopyranose mutase 5 isoform X1

    Conserved Domains (1) summary
    pfam03214
    Location:6 → 344
    RGP; Reversibly glycosylated polypeptide
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases