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LOC123213184 UDP-arabinopyranose mutase 1-like [ Mangifera indica (mango) ]

Gene ID: 123213184, updated on 30-Nov-2023

Summary

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Gene symbol
LOC123213184
Gene description
UDP-arabinopyranose mutase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Mangifera indica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Anacardiaceae; Mangifera
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Genomic context

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See LOC123213184 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
100 current CATAS_Mindica_2.1 (GCF_011075055.1) 4 NC_058140.1 (18973147..18975124, complement)

Chromosome 4 - NC_058140.1Genomic Context describing neighboring genes Neighboring gene protein CRABS CLAW Neighboring gene uncharacterized LOC123214163 Neighboring gene cytochrome P450 85A-like Neighboring gene PI-PLC X domain-containing protein At5g67130

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058140.1 Chromosome 4 Reference CATAS_Mindica_2.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-arabinopyranose mutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-L-arabinose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-arabinopyranose mutase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mangifera indica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CATAS_Mindica_2.1

Genomic

  1. NC_058140.1 Reference CATAS_Mindica_2.1

    Range
    18973147..18975124 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044632563.1 → XP_044488498.1  UDP-arabinopyranose mutase 1-like

    Conserved Domains (1) summary
    PLN03180
    Location:5 → 349
    PLN03180; reversibly glycosylated polypeptide; Provisional
Nucleotide Protein
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