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LOC123210978 mitochondrial arginine transporter BAC2 [ Mangifera indica (mango) ]

Gene ID: 123210978, updated on 30-Nov-2023

Summary

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Gene symbol
LOC123210978
Gene description
mitochondrial arginine transporter BAC2
Gene type
protein coding
RefSeq status
MODEL
Organism
Mangifera indica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Anacardiaceae; Mangifera
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Genomic context

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See LOC123210978 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
100 current CATAS_Mindica_2.1 (GCF_011075055.1) 3 NC_058139.1 (7347753..7350785)

Chromosome 3 - NC_058139.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123210963 Neighboring gene putative receptor-like protein kinase At4g00960 Neighboring gene pyridoxal 5'-phosphate synthase-like subunit PDX1.2 Neighboring gene pyridoxal 5'-phosphate synthase-like subunit PDX1.2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058139.1 Chromosome 3 Reference CATAS_Mindica_2.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mango (Mangifera indica L.) germplasm diversity based on single nucleotide polymorphisms derived from the transcriptome. Sherman A, et al. BMC Plant Biol, 2015 Nov 14. PMID 26573148, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: mitochondrial arginine transporter BAC2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mangifera indica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CATAS_Mindica_2.1

Genomic

  1. NC_058139.1 Reference CATAS_Mindica_2.1

    Range
    7347753..7350785
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044629476.1 → XP_044485411.1  LOW QUALITY PROTEIN: mitochondrial arginine transporter BAC2

    Conserved Domains (1) summary
    PTZ00169
    Location:87 → 272
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
Nucleotide Protein
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