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LOC123210214 hydroxyproline O-galactosyltransferase HPGT1-like [ Mangifera indica (mango) ]

Gene ID: 123210214, updated on 30-Nov-2023

Summary

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Gene symbol
LOC123210214
Gene description
hydroxyproline O-galactosyltransferase HPGT1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Mangifera indica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Anacardiaceae; Mangifera
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Genomic context

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See LOC123210214 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
12
Annotation release Status Assembly Chr Location
100 current CATAS_Mindica_2.1 (GCF_011075055.1) 3 NC_058139.1 (1027097..1031753, complement)

Chromosome 3 - NC_058139.1Genomic Context describing neighboring genes Neighboring gene putative glucose-6-phosphate 1-epimerase Neighboring gene transfer RNA methionine (anticodon CAU) Neighboring gene V-type proton ATPase subunit E Neighboring gene 6-phosphogluconate dehydrogenase, decarboxylating 3, chloroplastic-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058139.1 Chromosome 3 Reference CATAS_Mindica_2.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hydroxyproline O-galactosyltransferase HPGT1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mangifera indica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CATAS_Mindica_2.1

Genomic

  1. NC_058139.1 Reference CATAS_Mindica_2.1

    Range
    1027097..1031753 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044628459.1 → XP_044484394.1  hydroxyproline O-galactosyltransferase HPGT1-like isoform X1

    Conserved Domains (1) summary
    PLN03193
    Location:1 → 341
    PLN03193; beta-1,3-galactosyltransferase; Provisional

  2. XM_044628460.1 → XP_044484395.1  hydroxyproline O-galactosyltransferase HPGT1-like isoform X2

    Conserved Domains (1) summary
    PLN03193
    Location:1 → 271
    PLN03193; beta-1,3-galactosyltransferase; Provisional
Nucleotide Protein
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