U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC123210213 putative glucose-6-phosphate 1-epimerase [ Mangifera indica (mango) ]

Gene ID: 123210213, updated on 30-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC123210213
Gene description
putative glucose-6-phosphate 1-epimerase
Gene type
protein coding
RefSeq status
MODEL
Organism
Mangifera indica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Anacardiaceae; Mangifera
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC123210213 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
10
Annotation release Status Assembly Chr Location
100 current CATAS_Mindica_2.1 (GCF_011075055.1) 3 NC_058139.1 (1021278..1025159, complement)

Chromosome 3 - NC_058139.1Genomic Context describing neighboring genes Neighboring gene probable inactive receptor kinase At4g23740 Neighboring gene transfer RNA methionine (anticodon CAU) Neighboring gene hydroxyproline O-galactosyltransferase HPGT1-like Neighboring gene V-type proton ATPase subunit E

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_058139.1 Chromosome 3 Reference CATAS_Mindica_2.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Mango (Mangifera indica L.) germplasm diversity based on single nucleotide polymorphisms derived from the transcriptome. Sherman A, et al. BMC Plant Biol, 2015 Nov 14. PMID 26573148, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
putative glucose-6-phosphate 1-epimerase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Mangifera indica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CATAS_Mindica_2.1

Genomic

  1. NC_058139.1 Reference CATAS_Mindica_2.1

    Range
    1021278..1025159 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044628458.1 → XP_044484393.1  putative glucose-6-phosphate 1-epimerase

    Conserved Domains (1) summary
    cd09020
    Location:26 → 299
    D-hex-6-P-epi_like; D-hexose-6-phosphate epimerase-like

  2. XM_044628457.1 → XP_044484392.1  putative glucose-6-phosphate 1-epimerase

    Conserved Domains (1) summary
    cd09020
    Location:26 → 299
    D-hex-6-P-epi_like; D-hexose-6-phosphate epimerase-like

  3. XM_044628456.1 → XP_044484391.1  putative glucose-6-phosphate 1-epimerase

    Conserved Domains (1) summary
    cd09020
    Location:26 → 299
    D-hex-6-P-epi_like; D-hexose-6-phosphate epimerase-like

  4. XM_044628453.1 → XP_044484388.1  putative glucose-6-phosphate 1-epimerase

    Conserved Domains (1) summary
    cd09020
    Location:26 → 299
    D-hex-6-P-epi_like; D-hexose-6-phosphate epimerase-like

  5. XM_044628455.1 → XP_044484390.1  putative glucose-6-phosphate 1-epimerase

    Conserved Domains (1) summary
    cd09020
    Location:26 → 299
    D-hex-6-P-epi_like; D-hexose-6-phosphate epimerase-like

  6. XM_044628454.1 → XP_044484389.1  putative glucose-6-phosphate 1-epimerase

    Conserved Domains (1) summary
    cd09020
    Location:26 → 299
    D-hex-6-P-epi_like; D-hexose-6-phosphate epimerase-like
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.