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LOC123209641 callose synthase 9 [ Mangifera indica (mango) ]

Gene ID: 123209641, updated on 30-Nov-2023

Summary

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Gene symbol
LOC123209641
Gene description
callose synthase 9
Gene type
protein coding
RefSeq status
MODEL
Organism
Mangifera indica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Anacardiaceae; Mangifera
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Genomic context

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See LOC123209641 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
52
Annotation release Status Assembly Chr Location
100 current CATAS_Mindica_2.1 (GCF_011075055.1) 2 NC_058138.1 (15444259..15478266)

Chromosome 2 - NC_058138.1Genomic Context describing neighboring genes Neighboring gene callose synthase 3-like Neighboring gene T-complex protein 1 subunit eta Neighboring gene myb-like protein I Neighboring gene peroxidase N-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058138.1 Chromosome 2 Reference CATAS_Mindica_2.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
callose synthase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mangifera indica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CATAS_Mindica_2.1

Genomic

  1. NC_058138.1 Reference CATAS_Mindica_2.1

    Range
    15444259..15478266
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044627766.1 → XP_044483701.1  callose synthase 9

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases