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LOC123204134 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B-like [ Mangifera indica (mango) ]

Gene ID: 123204134, updated on 30-Nov-2023

Summary

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Gene symbol
LOC123204134
Gene description
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Mangifera indica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Anacardiaceae; Mangifera
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Genomic context

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See LOC123204134 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
6
Annotation release Status Assembly Chr Location
100 current CATAS_Mindica_2.1 (GCF_011075055.1) 20 NC_058156.1 (11141759..11148005)

Chromosome 20 - NC_058156.1Genomic Context describing neighboring genes Neighboring gene plastid division protein CDP1, chloroplastic-like Neighboring gene succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial Neighboring gene uncharacterized LOC123204135 Neighboring gene pentatricopeptide repeat-containing protein At1g71210, mitochondrial

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058156.1 Chromosome 20 Reference CATAS_Mindica_2.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oligosaccharyl transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mangifera indica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CATAS_Mindica_2.1

Genomic

  1. NC_058156.1 Reference CATAS_Mindica_2.1

    Range
    11141759..11148005
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044620702.1 → XP_044476637.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B-like

    Conserved Domains (1) summary
    COG1287
    Location:19 → 720
    Stt3; Asparagine N-glycosylation enzyme, membrane subunit Stt3 [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
Heading Accession and Version

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