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LOC123203930 beta-1,6-galactosyltransferase GALT31A-like [ Mangifera indica (mango) ]

Gene ID: 123203930, updated on 30-Nov-2023

Summary

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Gene symbol
LOC123203930
Gene description
beta-1,6-galactosyltransferase GALT31A-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Mangifera indica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Anacardiaceae; Mangifera
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Genomic context

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See LOC123203930 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
11
Annotation release Status Assembly Chr Location
100 current CATAS_Mindica_2.1 (GCF_011075055.1) 20 NC_058156.1 (1849662..1854470, complement)

Chromosome 20 - NC_058156.1Genomic Context describing neighboring genes Neighboring gene pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic-like Neighboring gene uncharacterized LOC123204249 Neighboring gene ankyrin repeat domain-containing protein 17-like Neighboring gene subtilisin-like protease SBT3.3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058156.1 Chromosome 20 Reference CATAS_Mindica_2.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,6-galactosyltransferase GALT31A-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mangifera indica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CATAS_Mindica_2.1

Genomic

  1. NC_058156.1 Reference CATAS_Mindica_2.1

    Range
    1849662..1854470 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044620418.1 → XP_044476353.1  beta-1,6-galactosyltransferase GALT31A-like

    Conserved Domains (1) summary
    PLN03193
    Location:2 → 403
    PLN03193; beta-1,3-galactosyltransferase; Provisional

  2. XM_044620419.1 → XP_044476354.1  beta-1,6-galactosyltransferase GALT31A-like

    Conserved Domains (1) summary
    PLN03193
    Location:2 → 403
    PLN03193; beta-1,3-galactosyltransferase; Provisional
Nucleotide Protein
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