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LOC123202627 dolichol-phosphate mannosyltransferase subunit 1-like [ Mangifera indica (mango) ]

Gene ID: 123202627, updated on 30-Nov-2023

Summary

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Gene symbol
LOC123202627
Gene description
dolichol-phosphate mannosyltransferase subunit 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Mangifera indica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Anacardiaceae; Mangifera
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Genomic context

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See LOC123202627 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
8
Annotation release Status Assembly Chr Location
100 current CATAS_Mindica_2.1 (GCF_011075055.1) 19 NC_058155.1 (12603737..12605805)

Chromosome 19 - NC_058155.1Genomic Context describing neighboring genes Neighboring gene small nuclear ribonucleoprotein SmD3b Neighboring gene 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic-like Neighboring gene uncharacterized LOC123202628 Neighboring gene stemmadenine O-acetyltransferase-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058155.1 Chromosome 19 Reference CATAS_Mindica_2.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mango (Mangifera indica L.) germplasm diversity based on single nucleotide polymorphisms derived from the transcriptome. Sherman A, et al. BMC Plant Biol, 2015 Nov 14. PMID 26573148, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-phosphate beta-D-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dolichol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichol-phosphate mannosyltransferase subunit 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mangifera indica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CATAS_Mindica_2.1

Genomic

  1. NC_058155.1 Reference CATAS_Mindica_2.1

    Range
    12603737..12605805
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044618594.1 → XP_044474529.1  dolichol-phosphate mannosyltransferase subunit 1-like

    Conserved Domains (1) summary
    PLN02726
    Location:6 → 240
    PLN02726; dolichyl-phosphate beta-D-mannosyltransferase
Nucleotide Protein
Heading Accession and Version

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