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LOC123202187 alpha-1,3/1,6-mannosyltransferase ALG2-like [ Mangifera indica (mango) ]

Gene ID: 123202187, updated on 18-Sep-2024

Summary

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Gene symbol
LOC123202187
Gene description
alpha-1,3/1,6-mannosyltransferase ALG2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Mangifera indica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Anacardiaceae; Mangifera
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Genomic context

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See LOC123202187 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
8
Annotation release Status Assembly Chr Location
100 current CATAS_Mindica_2.1 (GCF_011075055.1) 18 NC_058154.1 (9608678..9613133)

Chromosome 18 - NC_058154.1Genomic Context describing neighboring genes Neighboring gene protein DOG1-like 4 Neighboring gene uncharacterized LOC123201610 Neighboring gene pathogen-related protein-like Neighboring gene pathogen-related protein-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058154.1 Chromosome 18 Reference CATAS_Mindica_2.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mango (Mangifera indica L.) germplasm diversity based on single nucleotide polymorphisms derived from the transcriptome. Sherman A, et al. BMC Plant Biol, 2015 Nov 14. PMID 26573148, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GDP-Man:Man1GlcNAc2-PP-Dol alpha-1,3-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables alpha-1,3-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3/1,6-mannosyltransferase ALG2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mangifera indica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CATAS_Mindica_2.1

Genomic

  1. NC_058154.1 Reference CATAS_Mindica_2.1

    Range
    9608678..9613133
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044618010.1 → XP_044473945.1  alpha-1,3/1,6-mannosyltransferase ALG2-like

    Conserved Domains (1) summary
    cd03805
    Location:10 → 392
    GT4_ALG2-like; alpha-1,3/1,6-mannosyltransferase ALG2 and similar proteins
Nucleotide Protein
Heading Accession and Version

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