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LOC123192292 probable starch synthase 4, chloroplastic/amyloplastic [ Mangifera indica (mango) ]

Gene ID: 123192292, updated on 18-Sep-2024

Summary

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Gene symbol
LOC123192292
Gene description
probable starch synthase 4, chloroplastic/amyloplastic
Gene type
protein coding
RefSeq status
MODEL
Organism
Mangifera indica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Anacardiaceae; Mangifera
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Genomic context

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See LOC123192292 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
16
Annotation release Status Assembly Chr Location
100 current CATAS_Mindica_2.1 (GCF_011075055.1) 12 NC_058148.1 (14756752..14763522)

Chromosome 12 - NC_058148.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat-containing protein At5g02620-like Neighboring gene probable purine permease 10 Neighboring gene UDP-N-acetylglucosamine transferase subunit ALG14 Neighboring gene chlorophyll a-b binding protein of LHCII type 1 Neighboring gene chlorophyll a-b binding protein of LHCII type 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058148.1 Chromosome 12 Reference CATAS_Mindica_2.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable starch synthase 4, chloroplastic/amyloplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mangifera indica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CATAS_Mindica_2.1

Genomic

  1. NC_058148.1 Reference CATAS_Mindica_2.1

    Range
    14756752..14763522
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044604785.1 → XP_044460720.1  probable starch synthase 4, chloroplastic/amyloplastic

    Conserved Domains (1) summary
    PLN02939
    Location:34 → 1026
    PLN02939; transferase, transferring glycosyl groups
Nucleotide Protein
Heading Accession and Version

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