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LOC123137270 cytochrome c oxidase subunit 2-like [ Triticum aestivum (bread wheat) ]

Gene ID: 123137270, updated on 30-Nov-2023

Summary

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Gene symbol
LOC123137270
Gene description
cytochrome c oxidase subunit 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Triticum aestivum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Genomic context

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See LOC123137270 in Genome Data Viewer
Location:
chromosome: 6B
Exon count:
2
Annotation release Status Assembly Chr Location
100 current IWGSC CS RefSeq v2.1 (GCF_018294505.1) 6B NC_057810.1 (400905768..400908115)

Chromosome 6B - NC_057810.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123137269 Neighboring gene transfer RNA methionine (anticodon CAU) Neighboring gene NADH-ubiquinone oxidoreductase chain 3 Neighboring gene ribosomal protein S12, mitochondrial Neighboring gene transfer RNA lysine (anticodon UUU)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057810.1 Chromosome 6B Reference IWGSC CS RefSeq v2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Effect of the down-regulation of the high Grain Protein Content (GPC) genes on the wheat transcriptome during monocarpic senescence. Cantu D, et al. BMC Genomics, 2011 Oct 7. PMID 21981858, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytochrome-c oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ATP synthesis coupled electron transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytochrome c oxidase subunit 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Triticum aestivum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IWGSC CS RefSeq v2.1 Primary Assembly

Genomic

  1. NC_057810.1 Reference IWGSC CS RefSeq v2.1 Primary Assembly

    Range
    400905768..400908115
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044556960.1 → XP_044412895.1  cytochrome c oxidase subunit 2-like

    UniProtKB/TrEMBL
    A0A3B6PLD6
    Conserved Domains (1) summary
    MTH00023
    Location:17 → 264
    COX2; cytochrome c oxidase subunit II; Validated
Nucleotide Protein
Heading Accession and Version

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