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LOC123100392 xyloglucan galactosyltransferase KATAMARI1 homolog [ Triticum aestivum (bread wheat) ]

Gene ID: 123100392, updated on 30-Nov-2023

Summary

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Gene symbol
LOC123100392
Gene description
xyloglucan galactosyltransferase KATAMARI1 homolog
Gene type
protein coding
RefSeq status
MODEL
Organism
Triticum aestivum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Genomic context

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See LOC123100392 in Genome Data Viewer
Location:
chromosome: 4D
Exon count:
1
Annotation release Status Assembly Chr Location
100 current IWGSC CS RefSeq v2.1 (GCF_018294505.1) 4D NC_057805.1 (475048272..475049950)

Chromosome 4D - NC_057805.1Genomic Context describing neighboring genes Neighboring gene flowering-promoting factor 1-like protein 5 Neighboring gene flowering-promoting factor 1-like protein 5 Neighboring gene xyloglucan galactosyltransferase KATAMARI1 homolog Neighboring gene xyloglucan galactosyltransferase KATAMARI1 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057805.1 Chromosome 4D Reference IWGSC CS RefSeq v2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xyloglucan galactosyltransferase KATAMARI1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Triticum aestivum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IWGSC CS RefSeq v2.1 Primary Assembly

Genomic

  1. NC_057805.1 Reference IWGSC CS RefSeq v2.1 Primary Assembly

    Range
    475048272..475049950
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044522329.1 → XP_044378264.1  xyloglucan galactosyltransferase KATAMARI1 homolog

    UniProtKB/TrEMBL
    A0A3B6JQ07, A0A9R1K9G2
    Conserved Domains (2) summary
    pfam03016
    Location:55 → 426
    Exostosin; Exostosin family
    cl23892
    Location:414 → 466
    TyeA
Nucleotide Protein
Heading Accession and Version

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