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LOC123074751 cytochrome c oxidase subunit 2-like [ Triticum aestivum (bread wheat) ]

Gene ID: 123074751, updated on 30-Nov-2023

Summary

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Gene symbol
LOC123074751
Gene description
cytochrome c oxidase subunit 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Triticum aestivum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Genomic context

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See LOC123074751 in Genome Data Viewer
Location:
chromosome: 3D
Exon count:
2
Annotation release Status Assembly Chr Location
100 current IWGSC CS RefSeq v2.1 (GCF_018294505.1) 3D NC_057802.1 (400953349..401033683)

Chromosome 3D - NC_057802.1Genomic Context describing neighboring genes Neighboring gene transfer RNA serine (anticodon GGA) Neighboring gene transfer RNA phenylalanine (anticodon GAA) Neighboring gene transfer RNA aspartic acid (anticodon AUC) Neighboring gene coiled-coil domain-containing protein 25-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057802.1 Chromosome 3D Reference IWGSC CS RefSeq v2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytochrome-c oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ATP synthesis coupled electron transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytochrome c oxidase subunit 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Triticum aestivum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IWGSC CS RefSeq v2.1 Primary Assembly

Genomic

  1. NC_057802.1 Reference IWGSC CS RefSeq v2.1 Primary Assembly

    Range
    400953349..401033683
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044497510.1 → XP_044353445.1  cytochrome c oxidase subunit 2-like

    UniProtKB/TrEMBL
    A0A3B6C5U8
    Conserved Domains (1) summary
    MTH00023
    Location:17 → 209
    COX2; cytochrome c oxidase subunit II; Validated
Nucleotide Protein
Heading Accession and Version

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