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POFUT1 protein O-fucosyltransferase 1 [ Varanus komodoensis (Komodo dragon) ]

Gene ID: 123036410, updated on 22-Mar-2024

Summary

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Gene symbol
POFUT1
Gene description
protein O-fucosyltransferase 1
Locus tag
EYD10_05263
See related
Ensembl:ENSVKKG00000010774
Gene type
protein coding
RefSeq status
MODEL
Organism
Varanus komodoensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Anguimorpha; Paleoanguimorpha; Varanoidea; Varanidae; Varanus
Orthologs
human mouse all
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Genomic context

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See POFUT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ASM479886v1 (GCF_004798865.1) Unplaced Scaffold NW_025336481.1 (1066824..1077657, complement)

NW_025336481.1Genomic Context describing neighboring genes Neighboring gene ASXL transcriptional regulator 1 Neighboring gene kinesin family member 3B Neighboring gene PLAG1 like zinc finger 2 Neighboring gene transmembrane 9 superfamily member 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025336481 Unplaced Scaffold Reference ASM479886v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide-O-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDP-fucose protein O-fucosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Varanus komodoensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM479886v1

Genomic

  1. NW_025336481.1 Reference ASM479886v1

    Range
    1066824..1077657 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044455642.1 → XP_044311577.1  GDP-fucose protein O-fucosyltransferase 1 isoform X1

    Conserved Domains (1) summary
    cd11302
    Location:31 → 380
    O-FucT-1; GDP-fucose protein O-fucosyltransferase 1

  2. XM_044455643.1 → XP_044311578.1  GDP-fucose protein O-fucosyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A8D2L258
    Related
    ENSVKKP00000015798.1, ENSVKKT00000016172.1
    Conserved Domains (1) summary
    cd11302
    Location:1 → 320
    O-FucT-1; GDP-fucose protein O-fucosyltransferase 1
Nucleotide Protein
Heading Accession and Version

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