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MGAT5 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase [ Varanus komodoensis (Komodo dragon) ]

Gene ID: 123027373, updated on 22-Mar-2024

Summary

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Gene symbol
MGAT5
Gene description
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase
Locus tag
EYD10_11791
See related
Ensembl:ENSVKKG00000003304
Gene type
protein coding
RefSeq status
MODEL
Organism
Varanus komodoensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Anguimorpha; Paleoanguimorpha; Varanoidea; Varanidae; Varanus
Also known as
MGAT5_0; MGAT5_1; MGAT5_2
Orthologs
human mouse all
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Genomic context

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See MGAT5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
100 current ASM479886v1 (GCF_004798865.1) Unplaced Scaffold NW_025335798.1 (16532015..16693693)

NW_025335798.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 39 Neighboring gene LY6/PLAUR domain containing 1 Neighboring gene NCK associated protein 5 Neighboring gene transmembrane protein 163 Neighboring gene aminocarboxymuconate semialdehyde decarboxylase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025335798 Unplaced Scaffold Reference ASM479886v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A
Names
Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Varanus komodoensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM479886v1

Genomic

  1. NW_025335798.1 Reference ASM479886v1

    Range
    16532015..16693693
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044438180.1 → XP_044294115.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    UniProtKB/TrEMBL
    A0A8D2IVT1
    Conserved Domains (1) summary
    pfam15027
    Location:3 → 139
    DUF4525; Domain of unknown function (DUF4525)

  2. XM_044438185.1 → XP_044294120.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    UniProtKB/TrEMBL
    A0A8D2IVT1
    Conserved Domains (1) summary
    pfam15027
    Location:3 → 139
    DUF4525; Domain of unknown function (DUF4525)

  3. XM_044438186.1 → XP_044294121.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    UniProtKB/TrEMBL
    A0A8D2IVT1
    Conserved Domains (1) summary
    pfam15027
    Location:3 → 139
    DUF4525; Domain of unknown function (DUF4525)

  4. XM_044438182.1 → XP_044294117.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    UniProtKB/TrEMBL
    A0A8D2IVT1
    Related
    ENSVKKP00000004413.1, ENSVKKT00000004539.1
    Conserved Domains (1) summary
    pfam15027
    Location:3 → 139
    DUF4525; Domain of unknown function (DUF4525)

  5. XM_044438183.1 → XP_044294118.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    UniProtKB/TrEMBL
    A0A8D2IVT1
    Conserved Domains (1) summary
    pfam15027
    Location:3 → 139
    DUF4525; Domain of unknown function (DUF4525)

  6. XM_044438181.1 → XP_044294116.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    UniProtKB/TrEMBL
    A0A8D2IVT1
    Conserved Domains (1) summary
    pfam15027
    Location:3 → 139
    DUF4525; Domain of unknown function (DUF4525)

  7. XM_044438189.1 → XP_044294124.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    UniProtKB/TrEMBL
    A0A8D2IVT1
    Conserved Domains (1) summary
    pfam15027
    Location:3 → 139
    DUF4525; Domain of unknown function (DUF4525)

  8. XM_044438184.1 → XP_044294119.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    UniProtKB/TrEMBL
    A0A8D2IVT1
    Conserved Domains (1) summary
    pfam15027
    Location:3 → 139
    DUF4525; Domain of unknown function (DUF4525)

  9. XM_044438188.1 → XP_044294123.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    UniProtKB/TrEMBL
    A0A8D2IVT1
    Conserved Domains (1) summary
    pfam15027
    Location:3 → 139
    DUF4525; Domain of unknown function (DUF4525)
Nucleotide Protein
Heading Accession and Version

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