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LMAN2L lectin, mannose binding 2 like [ Varanus komodoensis (Komodo dragon) ]

Gene ID: 123027114, updated on 19-Jun-2024

Summary

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Gene symbol
LMAN2L
Gene description
lectin, mannose binding 2 like
Locus tag
EYD10_11371
Gene type
protein coding
RefSeq status
MODEL
Organism
Varanus komodoensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Anguimorpha; Paleoanguimorpha; Varanoidea; Varanidae; Varanus
Orthologs
human mouse all
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Genomic context

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See LMAN2L in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM479886v1 (GCF_004798865.1) Unplaced Scaffold NW_025335762.1 (140594..158291, complement)

NW_025335762.1Genomic Context describing neighboring genes Neighboring gene AT-rich interaction domain 5A Neighboring gene uncharacterized LOC123027158 Neighboring gene small serum protein 5-like Neighboring gene fer-1 like family member 5 Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 4 Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025335762 Unplaced Scaffold Reference ASM479886v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
VIP36-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Varanus komodoensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM479886v1

Genomic

  1. NW_025335762.1 Reference ASM479886v1

    Range
    140594..158291 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044437554.1 → XP_044293489.1  VIP36-like protein isoform X2

    Conserved Domains (1) summary
    cl14058
    Location:11 → 257
    lectin_L-type; legume lectins

  2. XM_044437555.1 → XP_044293490.1  VIP36-like protein isoform X3

    UniProtKB/TrEMBL
    A0A8D2JLI8
    Conserved Domains (1) summary
    cd06901
    Location:4 → 252
    lectin_VIP36_VIPL; VIP36 and VIPL type 1 transmembrane proteins, lectin domain

  3. XM_044437558.1 → XP_044293493.1  VIP36-like protein isoform X6

    Conserved Domains (1) summary
    cl14058
    Location:4 → 263
    lectin_L-type; legume lectins

  4. XM_044437557.1 → XP_044293492.1  VIP36-like protein isoform X5

    Conserved Domains (1) summary
    cl14058
    Location:4 → 198
    lectin_L-type; legume lectins

  5. XM_044437556.1 → XP_044293491.1  VIP36-like protein isoform X4

    Conserved Domains (1) summary
    cl14058
    Location:4 → 226
    lectin_L-type; legume lectins

  6. XM_044437552.1 → XP_044293487.1  VIP36-like protein isoform X1

    Conserved Domains (1) summary
    cl14058
    Location:4 → 226
    lectin_L-type; legume lectins
Nucleotide Protein
Heading Accession and Version

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