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AMACR alpha-methylacyl-CoA racemase [ Varanus komodoensis (Komodo dragon) ]

Gene ID: 123024167, updated on 22-Mar-2024

Summary

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Gene symbol
AMACR
Gene description
alpha-methylacyl-CoA racemase
Locus tag
EYD10_09793
See related
Ensembl:ENSVKKG00000000050
Gene type
protein coding
RefSeq status
MODEL
Organism
Varanus komodoensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Anguimorpha; Paleoanguimorpha; Varanoidea; Varanidae; Varanus
Orthologs
human mouse all
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Genomic context

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See AMACR in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current ASM479886v1 (GCF_004798865.1) Unplaced Scaffold NW_025335606.1 (14301287..14314037, complement)

NW_025335606.1Genomic Context describing neighboring genes Neighboring gene relaxin family peptide receptor 3 Neighboring gene solute carrier family 45 member 2 Neighboring gene C1q and TNF related 3 Neighboring gene retinoic acid induced 14

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025335606 Unplaced Scaffold Reference ASM479886v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-methylacyl-CoA racemase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bile acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-methylacyl-CoA racemase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Varanus komodoensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM479886v1

Genomic

  1. NW_025335606.1 Reference ASM479886v1

    Range
    14301287..14314037 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044431590.1 → XP_044287525.1  alpha-methylacyl-CoA racemase

    UniProtKB/TrEMBL
    A0A8D2IN38
    Related
    ENSVKKP00000000040.1, ENSVKKT00000000041.1
    Conserved Domains (1) summary
    COG1804
    Location:3 → 368
    CaiB; Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases [Lipid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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