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GOLPH3 golgi phosphoprotein 3 [ Varanus komodoensis (Komodo dragon) ]

Gene ID: 123023979, updated on 22-Mar-2024

Summary

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Gene symbol
GOLPH3
Gene description
golgi phosphoprotein 3
Locus tag
EYD10_09783
See related
Ensembl:ENSVKKG00000011473
Gene type
protein coding
RefSeq status
MODEL
Organism
Varanus komodoensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Anguimorpha; Paleoanguimorpha; Varanoidea; Varanidae; Varanus
Orthologs
human mouse all
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Genomic context

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See GOLPH3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM479886v1 (GCF_004798865.1) Unplaced Scaffold NW_025335606.1 (13549432..13574547, complement)

NW_025335606.1Genomic Context describing neighboring genes Neighboring gene PDZ domain-containing protein 2-like Neighboring gene uncharacterized LOC123023980 Neighboring gene myotubularin related protein 12 Neighboring gene zinc finger RNA binding protein Neighboring gene small nucleolar RNA SNORA66

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025335606 Unplaced Scaffold Reference ASM479886v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-4-phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in Golgi to plasma membrane protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in Golgi vesicle budding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Golgi phosphoprotein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Varanus komodoensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM479886v1

Genomic

  1. NW_025335606.1 Reference ASM479886v1

    Range
    13549432..13574547 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044431175.1 → XP_044287110.1  Golgi phosphoprotein 3

    UniProtKB/TrEMBL
    A0A8D2L522
    Related
    ENSVKKP00000016788.1, ENSVKKT00000017204.1
    Conserved Domains (1) summary
    pfam05719
    Location:65 → 274
    GPP34; Golgi phosphoprotein 3 (GPP34)
Nucleotide Protein
Heading Accession and Version

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