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PGLS 6-phosphogluconolactonase [ Varanus komodoensis (Komodo dragon) ]

Gene ID: 123023942, updated on 22-Mar-2024

Summary

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Gene symbol
PGLS
Gene description
6-phosphogluconolactonase
Locus tag
EYD10_09883
See related
Ensembl:ENSVKKG00000008976
Gene type
protein coding
RefSeq status
MODEL
Organism
Varanus komodoensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Anguimorpha; Paleoanguimorpha; Varanoidea; Varanidae; Varanus
Orthologs
human mouse all
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Genomic context

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See PGLS in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current ASM479886v1 (GCF_004798865.1) Unplaced Scaffold NW_025335606.1 (19162521..19175053, complement)

NW_025335606.1Genomic Context describing neighboring genes Neighboring gene HIV-1 Tat interactive protein 2 Neighboring gene olfactory receptor 1019-like Neighboring gene collagen beta(1-O)galactosyltransferase 1 Neighboring gene solute carrier family 27 member 1 Neighboring gene uncharacterized LOC123023943

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025335606 Unplaced Scaffold Reference ASM479886v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 6-phosphogluconolactonase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pentose-phosphate shunt IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
6-phosphogluconolactonase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Varanus komodoensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM479886v1

Genomic

  1. NW_025335606.1 Reference ASM479886v1

    Range
    19162521..19175053 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044431086.1 → XP_044287021.1  6-phosphogluconolactonase

    UniProtKB/TrEMBL
    A0A8D2KWP1
    Related
    ENSVKKP00000012960.1, ENSVKKT00000013275.1
    Conserved Domains (1) summary
    cd01400
    Location:27 → 244
    6PGL; 6-Phosphogluconolactonase (6PGL) subfamily; 6PGL catalyzes the second step of the oxidative phase of the pentose phosphate pathway, the hydrolyzation of 6-phosphoglucono-1,5-lactone (delta form) to 6-phosphogluconate. 6PGL is thought to guard against the ...
Nucleotide Protein
Heading Accession and Version

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