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PALLD palladin, cytoskeletal associated protein [ Varanus komodoensis (Komodo dragon) ]

Gene ID: 123023741, updated on 22-Mar-2024

Summary

Gene symbol
PALLD
Gene description
palladin, cytoskeletal associated protein
Locus tag
EYD10_09656
See related
Ensembl:ENSVKKG00000008230
Gene type
protein coding
RefSeq status
MODEL
Organism
Varanus komodoensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Anguimorpha; Paleoanguimorpha; Varanoidea; Varanidae; Varanus
Also known as
PALLD_0; Palld_1; Palladin
Orthologs
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Genomic context

See PALLD in Genome Data Viewer
Location:
chromosome: Un
Exon count:
26
Annotation release Status Assembly Chr Location
100 current ASM479886v1 (GCF_004798865.1) Unplaced Scaffold NW_025335589.1 (15001624..15266819)

NW_025335589.1Genomic Context describing neighboring genes Neighboring gene serine-rich adhesin for platelets-like Neighboring gene annexin A10 Neighboring gene DExD/H-box helicase 60 Neighboring gene A-kinase anchor protein 4-like Neighboring gene carbonyl reductase 4 Neighboring gene SH3 domain containing ring finger 1

Genomic regions, transcripts, and products

Genomic Sequence:
NW_025335589 Unplaced Scaffold Reference ASM479886v1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Varanus komodoensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM479886v1

Genomic

  1. NW_025335589.1 Reference ASM479886v1

    Range
    15001624..15266819
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044430707.1XP_044286642.1  palladin isoform X1

    UniProtKB/TrEMBL
    A0A8D2J8F8
    Conserved Domains (3) summary
    smart00409
    Location:317400
    IG; Immunoglobulin
    smart00410
    Location:485575
    IG_like; Immunoglobulin like
    cd00096
    Location:495499
    Ig; Ig strand B [structural motif]
  2. XM_044430706.1XP_044286641.1  palladin isoform X1

    UniProtKB/TrEMBL
    A0A8D2J8F8
    Conserved Domains (3) summary
    smart00409
    Location:317400
    IG; Immunoglobulin
    smart00410
    Location:485575
    IG_like; Immunoglobulin like
    cd00096
    Location:495499
    Ig; Ig strand B [structural motif]
  3. XM_044430709.1XP_044286644.1  palladin isoform X3

    UniProtKB/TrEMBL
    A0A8D2KWA3
    Related
    ENSVKKP00000011832.1, ENSVKKT00000012113.1
    Conserved Domains (1) summary
    smart00409
    Location:317400
    IG; Immunoglobulin
  4. XM_044430705.1XP_044286640.1  palladin isoform X1

    UniProtKB/TrEMBL
    A0A8D2J8F8
    Related
    ENSVKKP00000011827.1, ENSVKKT00000012108.1
    Conserved Domains (3) summary
    smart00409
    Location:317400
    IG; Immunoglobulin
    smart00410
    Location:485575
    IG_like; Immunoglobulin like
    cd00096
    Location:495499
    Ig; Ig strand B [structural motif]
  5. XM_044430708.1XP_044286643.1  palladin isoform X2

    Conserved Domains (3) summary
    smart00409
    Location:317400
    IG; Immunoglobulin
    smart00410
    Location:485575
    IG_like; Immunoglobulin like
    cd00096
    Location:495499
    Ig; Ig strand B [structural motif]
  6. XM_044430710.1XP_044286645.1  palladin isoform X4

    Conserved Domains (3) summary
    smart00409
    Location:873953
    IG; Immunoglobulin
    smart00410
    Location:66156
    IG_like; Immunoglobulin like
    cd00096
    Location:7680
    Ig; Ig strand B [structural motif]
  7. XM_044430711.1XP_044286646.1  palladin isoform X5

    Conserved Domains (3) summary
    smart00409
    Location:449533
    IG; Immunoglobulin
    smart00410
    Location:553633
    IG_like; Immunoglobulin like
    cd00096
    Location:559563
    Ig; Ig strand B [structural motif]