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KDSR 3-ketodihydrosphingosine reductase [ Varanus komodoensis (Komodo dragon) ]

Gene ID: 123021681, updated on 22-Mar-2024

Summary

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Gene symbol
KDSR
Gene description
3-ketodihydrosphingosine reductase
Locus tag
EYD10_08575
See related
Ensembl:ENSVKKG00000010303
Gene type
protein coding
RefSeq status
MODEL
Organism
Varanus komodoensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Anguimorpha; Paleoanguimorpha; Varanoidea; Varanidae; Varanus
Orthologs
human mouse all
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Genomic context

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See KDSR in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM479886v1 (GCF_004798865.1) Unplaced Scaffold NW_025335505.1 (8998225..9036639, complement)

NW_025335505.1Genomic Context describing neighboring genes Neighboring gene MARVEL domain-containing protein 3-like Neighboring gene BCL2 apoptosis regulator Neighboring gene vacuolar protein sorting 4 homolog B Neighboring gene serpin family B member 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025335505 Unplaced Scaffold Reference ASM479886v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-dehydrosphinganine reductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 3-keto-sphinganine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
3-ketodihydrosphingosine reductase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Varanus komodoensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM479886v1

Genomic

  1. NW_025335505.1 Reference ASM479886v1

    Range
    8998225..9036639 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044426683.1 → XP_044282618.1  3-ketodihydrosphingosine reductase

    UniProtKB/TrEMBL
    A0A8D2L0U6, A0A8D2Q2D2
    Related
    ENSVKKP00000015029.1, ENSVKKT00000015388.1
    Conserved Domains (1) summary
    cd08939
    Location:44 → 280
    KDSR-like_SDR_c; 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

RNA

  1. XR_006414373.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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