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ALG12 ALG12 alpha-1,6-mannosyltransferase [ Varanus komodoensis (Komodo dragon) ]

Gene ID: 123020080, updated on 22-Mar-2024

Summary

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Gene symbol
ALG12
Gene description
ALG12 alpha-1,6-mannosyltransferase
Locus tag
EYD10_07354
See related
Ensembl:ENSVKKG00000016214
Gene type
protein coding
RefSeq status
MODEL
Organism
Varanus komodoensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Anguimorpha; Paleoanguimorpha; Varanoidea; Varanidae; Varanus
Orthologs
human mouse all
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Genomic context

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See ALG12 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM479886v1 (GCF_004798865.1) Unplaced Scaffold NW_025335409.1 (3327538..3359298)

NW_025335409.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123020073 Neighboring gene uncharacterized LOC123020072 Neighboring gene cysteine rich with EGF like domains 2 Neighboring gene zinc finger BED-type containing 4 Neighboring gene bromodomain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025335409 Unplaced Scaffold Reference ASM479886v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase
Names
Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Varanus komodoensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM479886v1

Genomic

  1. NW_025335409.1 Reference ASM479886v1

    Range
    3327538..3359298
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044423489.1 → XP_044279424.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

    Conserved Domains (1) summary
    cl21590
    Location:25 → 362
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  2. XM_044423492.1 → XP_044279427.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X3

    Conserved Domains (1) summary
    cl21590
    Location:25 → 303
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  3. XM_044423493.1 → XP_044279428.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X4

    Conserved Domains (1) summary
    cl21590
    Location:25 → 297
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  4. XM_044423490.1 → XP_044279425.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A8D2LNY7
    Related
    ENSVKKP00000024600.1, ENSVKKT00000025200.1
    Conserved Domains (1) summary
    cl21590
    Location:13 → 350
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
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