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CHAT choline O-acetyltransferase [ Varanus komodoensis (Komodo dragon) ]

Gene ID: 123018257, updated on 22-Mar-2024

Summary

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Gene symbol
CHAT
Gene description
choline O-acetyltransferase
See related
Ensembl:ENSVKKG00000008584
Gene type
protein coding
RefSeq status
MODEL
Organism
Varanus komodoensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Anguimorpha; Paleoanguimorpha; Varanoidea; Varanidae; Varanus
Orthologs
human mouse all
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Genomic context

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See CHAT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current ASM479886v1 (GCF_004798865.1) Unplaced Scaffold NW_025335317.1 (9054259..9088535)

NW_025335317.1Genomic Context describing neighboring genes Neighboring gene retinal G protein coupled receptor Neighboring gene solute carrier family 18 member A3 Neighboring gene chromosome unknown C10orf53 homolog Neighboring gene oxoglutarate dehydrogenase L

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025335317 Unplaced Scaffold Reference ASM479886v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables choline O-acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acetylcholine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuromuscular synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
choline O-acetyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Varanus komodoensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM479886v1

Genomic

  1. NW_025335317.1 Reference ASM479886v1

    Range
    9054259..9088535
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044420117.1 → XP_044276052.1  choline O-acetyltransferase

    UniProtKB/TrEMBL
    A0A8D2JI60
    Related
    ENSVKKP00000012337.1, ENSVKKT00000012631.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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