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cbx4 chromobox homolog 4 (Pc class homolog, Drosophila) [ Thunnus albacares (yellowfin tuna) ]

Gene ID: 122967357, updated on 22-Mar-2024

Summary

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Gene symbol
cbx4
Gene description
chromobox homolog 4 (Pc class homolog, Drosophila)
See related
EnsemblRapid:ENSTABG00005023754
Gene type
protein coding
RefSeq status
MODEL
Organism
Thunnus albacares
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Pelagiaria; Scombriformes; Scombridae; Thunnus
Orthologs
human zebrafish all
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Genomic context

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See cbx4 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
6
Annotation release Status Assembly Chr Location
100 current fThuAlb1.1 (GCF_914725855.1) 17 NC_058122.1 (14549979..14558045, complement)

Chromosome 17 - NC_058122.1Genomic Context describing neighboring genes Neighboring gene meteorin-like protein Neighboring gene chromobox homolog 8a (Pc class homolog, Drosophila) Neighboring gene TBC1 domain family, member 16 Neighboring gene alpha glucosidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058122.1 Chromosome 17 Reference fThuAlb1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 SUMO-protein ligase CBX4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Thunnus albacares Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fThuAlb1.1

Genomic

  1. NC_058122.1 Reference fThuAlb1.1

    Range
    14549979..14558045 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044331963.1 → XP_044187898.1  E3 SUMO-protein ligase CBX4 isoform X1

    Related
    ENSTABP00005058612.1, ENSTABT00005060203.1
    Conserved Domains (1) summary
    cd18645
    Location:8 → 62
    CD_Cbx4; chromodomain of chromobox homolog 4

  2. XM_044331964.1 → XP_044187899.1  E3 SUMO-protein ligase CBX4 isoform X2

    Conserved Domains (1) summary
    cl28914
    Location:19 → 42
    CD_CSD; CHROMO (CHRromatin Organization Modifier) domains and chromo shadow domains
Nucleotide Protein
Heading Accession and Version

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