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CLEC16A C-type lectin domain containing 16A [ Bufo gargarizans (Asiatic toad) ]

Gene ID: 122944510, updated on 22-Mar-2024

Summary

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Gene symbol
CLEC16A
Gene description
C-type lectin domain containing 16A
See related
EnsemblRapid:ENSBGGG00000012989
Gene type
protein coding
RefSeq status
MODEL
Organism
Bufo gargarizans
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Hyloidea; Bufonidae; Bufo
Orthologs
human mouse all
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Genomic context

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See CLEC16A in Genome Data Viewer
Location:
chromosome: 8
Exon count:
25
Annotation release Status Assembly Chr Location
100 current ASM1485885v1 (GCF_014858855.1) 8 NC_058087.1 (152488293..152769242, complement)

Chromosome 8 - NC_058087.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122945877 Neighboring gene uncharacterized LOC122945256 Neighboring gene uncharacterized LOC122945726 Neighboring gene Dexi homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058087.1 Chromosome 8 Reference ASM1485885v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosome to lysosome transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of autophagosome maturation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endolysosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in late endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein CLEC16A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bufo gargarizans Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1485885v1 Primary Assembly

Genomic

  1. NC_058087.1 Reference ASM1485885v1 Primary Assembly

    Range
    152488293..152769242 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044302863.1 → XP_044158798.1  protein CLEC16A

    Related
    ENSBGGP00000017406.1, ENSBGGT00000019312.1
Nucleotide Protein
Heading Accession and Version

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