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XYLB xylulokinase [ Bufo gargarizans (Asiatic toad) ]

Gene ID: 122938392, updated on 11-Apr-2024

Summary

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Gene symbol
XYLB
Gene description
xylulokinase
See related
EnsemblRapid:ENSBGGG00000008113
Gene type
protein coding
RefSeq status
MODEL
Organism
Bufo gargarizans
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Hyloidea; Bufonidae; Bufo
Orthologs
human mouse all
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Genomic context

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See XYLB in Genome Data Viewer
Location:
chromosome: 5
Exon count:
20
Annotation release Status Assembly Chr Location
100 current ASM1485885v1 (GCF_014858855.1) 5 NC_058084.1 (404893546..405263586, complement)

Chromosome 5 - NC_058084.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122937952 Neighboring gene uncharacterized LOC122939478 Neighboring gene chromosome 5 C9orf152 homolog Neighboring gene uncharacterized LOC122938737 Neighboring gene negative regulator of ubiquitin like proteins 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058084.1 Chromosome 5 Reference ASM1485885v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-xylulokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in D-xylose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in xylulose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xylulose kinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bufo gargarizans Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1485885v1 Primary Assembly

Genomic

  1. NC_058084.1 Reference ASM1485885v1 Primary Assembly

    Range
    404893546..405263586 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044293861.1 → XP_044149796.1  xylulose kinase isoform X1

    Related
    ENSBGGP00000010588.1, ENSBGGT00000012008.1
    Conserved Domains (1) summary
    cd07776
    Location:6 → 476
    FGGY_D-XK_euk; eukaryotic D-xylulose kinases; a subfamily of the FGGY family of carbohydrate kinases

  2. XM_044293862.1 → XP_044149797.1  xylulose kinase isoform X2

    Related
    ENSBGGP00000010566.1, ENSBGGT00000011986.1
    Conserved Domains (1) summary
    cd07776
    Location:6 → 476
    FGGY_D-XK_euk; eukaryotic D-xylulose kinases; a subfamily of the FGGY family of carbohydrate kinases
Nucleotide Protein
Heading Accession and Version

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