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SULF1 sulfatase 1 [ Bufo gargarizans (Asiatic toad) ]

Gene ID: 122937914, updated on 22-Mar-2024

Summary

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Gene symbol
SULF1
Gene description
sulfatase 1
See related
EnsemblRapid:ENSBGGG00000014910
Gene type
protein coding
RefSeq status
MODEL
Organism
Bufo gargarizans
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Hyloidea; Bufonidae; Bufo
Orthologs
human mouse all
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Genomic context

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See SULF1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
21
Annotation release Status Assembly Chr Location
100 current ASM1485885v1 (GCF_014858855.1) 5 NC_058084.1 (103603650..103712602)

Chromosome 5 - NC_058084.1Genomic Context describing neighboring genes Neighboring gene chromosome 5 C8orf34 homolog Neighboring gene uncharacterized LOC122939038 Neighboring gene uncharacterized LOC122939325 Neighboring gene solute carrier organic anion transporter family member 5A1 Neighboring gene PR/SET domain 14

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058084.1 Chromosome 5 Reference ASM1485885v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine-6-sulfatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycosaminoglycan binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
extracellular sulfatase Sulf-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bufo gargarizans Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1485885v1 Primary Assembly

Genomic

  1. NC_058084.1 Reference ASM1485885v1 Primary Assembly

    Range
    103603650..103712602
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044293104.1 → XP_044149039.1  extracellular sulfatase Sulf-1 isoform X1

    Related
    ENSBGGP00000019724.1, ENSBGGT00000021929.1
    Conserved Domains (2) summary
    cd16147
    Location:38 → 380
    G6S; glucosamine (N-acetyl)-6-sulfatase(G6S, GNS) AND sulfatase 1(SULF1)
    cl23718
    Location:770 → 819
    ALP_like; alkaline phosphatases and sulfatases

  2. XM_044293105.1 → XP_044149040.1  extracellular sulfatase Sulf-1 isoform X2

    Related
    ENSBGGP00000019618.1, ENSBGGT00000021811.1
    Conserved Domains (2) summary
    cd16147
    Location:38 → 380
    G6S; glucosamine (N-acetyl)-6-sulfatase(G6S, GNS) AND sulfatase 1(SULF1)
    cl23718
    Location:770 → 819
    ALP_like; alkaline phosphatases and sulfatases
Nucleotide Protein
Heading Accession and Version

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