U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TECTA tectorin alpha [ Bufo gargarizans (Asiatic toad) ]

Gene ID: 122935502, updated on 22-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
TECTA
Gene description
tectorin alpha
See related
EnsemblRapid:ENSBGGG00000014505
Gene type
protein coding
RefSeq status
MODEL
Organism
Bufo gargarizans
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Hyloidea; Bufonidae; Bufo
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See TECTA in Genome Data Viewer
Location:
chromosome: 4
Exon count:
23
Annotation release Status Assembly Chr Location
100 current ASM1485885v1 (GCF_014858855.1) 4 NC_058083.1 (478730957..478911285)

Chromosome 4 - NC_058083.1Genomic Context describing neighboring genes Neighboring gene glutamate ionotropic receptor kainate type subunit 4 Neighboring gene tubulin folding cofactor E like Neighboring gene nicotinamide N-methyltransferase-like Neighboring gene RNA exonuclease 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_058083.1 Chromosome 4 Reference ASM1485885v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
LOW QUALITY PROTEIN: alpha-tectorin

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Bufo gargarizans Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1485885v1 Primary Assembly

Genomic

  1. NC_058083.1 Reference ASM1485885v1 Primary Assembly

    Range
    478730957..478911285
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044291273.1 → XP_044147208.1  LOW QUALITY PROTEIN: alpha-tectorin

    Related
    ENSBGGP00000019071.1, ENSBGGT00000021238.1
    Conserved Domains (5) summary
    smart00216
    Location:309 → 473
    VWD; von Willebrand factor (vWF) type D domain
    smart00241
    Location:1796 → 2050
    ZP; Zona pellucida (ZP) domain
    smart00539
    Location:94 → 250
    NIDO; Extracellular domain of unknown function in nidogen (entactin) and hypothetical proteins
    smart00832
    Location:513 → 588
    C8; This domain contains 8 conserved cysteine residues
    cl17735
    Location:1423 → 1476
    VWC; von Willebrand factor type C domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.