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CERS5 ceramide synthase 5 [ Bufo gargarizans (Asiatic toad) ]

Gene ID: 122932495, updated on 22-Mar-2024

Summary

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Gene symbol
CERS5
Gene description
ceramide synthase 5
See related
EnsemblRapid:ENSBGGG00000008267
Gene type
protein coding
RefSeq status
MODEL
Organism
Bufo gargarizans
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Hyloidea; Bufonidae; Bufo
Orthologs
human mouse all
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Genomic context

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See CERS5 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM1485885v1 (GCF_014858855.1) 3 NC_058082.1 (56336396..56424561)

Chromosome 3 - NC_058082.1Genomic Context describing neighboring genes Neighboring gene fibronectin type III domain containing 3A Neighboring gene LIM domain and actin binding 1 Neighboring gene cytochrome c oxidase assembly protein COX14 homolog Neighboring gene uncharacterized LOC122930442

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058082.1 Chromosome 3 Reference ASM1485885v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sphingosine N-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ceramide synthase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bufo gargarizans Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1485885v1 Primary Assembly

Genomic

  1. NC_058082.1 Reference ASM1485885v1 Primary Assembly

    Range
    56336396..56424561
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044286945.1 → XP_044142880.1  ceramide synthase 5 isoform X1

    Related
    ENSBGGP00000010847.1, ENSBGGT00000012268.1
    Conserved Domains (2) summary
    smart00724
    Location:131 → 332
    TLC; TRAM, LAG1 and CLN8 homology domains
    cd00086
    Location:81 → 128
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

  2. XM_044286946.1 → XP_044142881.1  ceramide synthase 5 isoform X2

    Related
    ENSBGGP00000010864.1, ENSBGGT00000012285.1
    Conserved Domains (2) summary
    smart00724
    Location:131 → 332
    TLC; TRAM, LAG1 and CLN8 homology domains
    cd00086
    Location:81 → 128
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
Nucleotide Protein
Heading Accession and Version

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