U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC122932257 uncharacterized protein K02A2.6-like [ Bufo gargarizans (Asiatic toad) ]

Gene ID: 122932257, updated on 30-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC122932257
Gene description
uncharacterized protein K02A2.6-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Bufo gargarizans
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Hyloidea; Bufonidae; Bufo
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC122932257 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Annotation release Status Assembly Chr Location
100 current ASM1485885v1 (GCF_014858855.1) 3 NC_058082.1 (84360403..84364759, complement)

Chromosome 3 - NC_058082.1Genomic Context describing neighboring genes Neighboring gene mitochondrial intermediate peptidase Neighboring gene TNF receptor superfamily member 19 Neighboring gene sacsin molecular chaperone Neighboring gene sarcoglycan gamma

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_058082.1 Chromosome 3 Reference ASM1485885v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables aspartic-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA integration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein K02A2.6-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Bufo gargarizans Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1485885v1 Primary Assembly

Genomic

  1. NC_058082.1 Reference ASM1485885v1 Primary Assembly

    Range
    84360403..84364759 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044286560.1 → XP_044142495.1  uncharacterized protein K02A2.6-like

    Conserved Domains (5) summary
    PTZ00368
    Location:206 → 258
    PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional
    PRK09409
    Location:1076 → 1159
    PRK09409; IS2 transposase TnpB; Reviewed
    cd01647
    Location:475 → 651
    RT_LTR; Reverse transcriptases (RTs) from retrotransposons and retroviruses which have long terminal repeats (LTRs) in their DNA copies but not in their RNA template. RT catalyzes DNA replication from an RNA template, and is responsible for the replication of ...
    cd09274
    Location:745 → 870
    RNase_HI_RT_Ty3; Ty3/Gypsy family of RNase HI in long-term repeat retroelements
    cl11403
    Location:304 → 392
    pepsin_retropepsin_like; Cellular and retroviral pepsin-like aspartate proteases
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases