U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC122931372 glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like [ Bufo gargarizans (Asiatic toad) ]

Gene ID: 122931372, updated on 30-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC122931372
Gene description
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Bufo gargarizans
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Hyloidea; Bufonidae; Bufo
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC122931372 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Annotation release Status Assembly Chr Location
100 current ASM1485885v1 (GCF_014858855.1) 3 NC_058082.1 (61585196..61600771)

Chromosome 3 - NC_058082.1Genomic Context describing neighboring genes Neighboring gene keratin, type II cytoskeletal 59 kDa, component IV-like Neighboring gene keratin, type II cytoskeletal 4-like Neighboring gene ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 Neighboring gene poly(U)-specific endoribonuclease-D-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_058082.1 Chromosome 3 Reference ASM1485885v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Bufo gargarizans Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1485885v1 Primary Assembly

Genomic

  1. NC_058082.1 Reference ASM1485885v1 Primary Assembly

    Range
    61585196..61600771
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044285443.1 → XP_044141378.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like

    Conserved Domains (1) summary
    cl21608
    Location:86 → 174
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases