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KIRREL3 kirre like nephrin family adhesion molecule 3 [ Bufo gargarizans (Asiatic toad) ]

Gene ID: 122928679, updated on 22-Mar-2024

Summary

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Gene symbol
KIRREL3
Gene description
kirre like nephrin family adhesion molecule 3
See related
EnsemblRapid:ENSBGGG00000003768
Gene type
protein coding
RefSeq status
MODEL
Organism
Bufo gargarizans
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Hyloidea; Bufonidae; Bufo
Orthologs
human mouse all
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Genomic context

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See KIRREL3 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
17
Annotation release Status Assembly Chr Location
100 current ASM1485885v1 (GCF_014858855.1) 2 NC_058081.1 (578487878..579351103)

Chromosome 2 - NC_058081.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122926745 Neighboring gene ETS proto-oncogene 1, transcription factor Neighboring gene CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4-like Neighboring gene CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058081.1 Chromosome 2 Reference ASM1485885v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bufo gargarizans Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1485885v1 Primary Assembly

Genomic

  1. NC_058081.1 Reference ASM1485885v1 Primary Assembly

    Range
    578487878..579351103
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044281769.1 → XP_044137704.1  kin of IRRE-like protein 3 isoform X1

    Related
    ENSBGGP00000005503.1, ENSBGGT00000005812.1
    Conserved Domains (3) summary
    smart00408
    Location:160 → 230
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:338 → 413
    IG; Immunoglobulin
    cd05758
    Location:415 → 512
    IgI_5_KIRREL3-like; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains

  2. XM_044281770.1 → XP_044137705.1  kin of IRRE-like protein 3 isoform X2

    Related
    ENSBGGP00000005522.1, ENSBGGT00000005831.1
    Conserved Domains (3) summary
    smart00408
    Location:160 → 230
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:338 → 413
    IG; Immunoglobulin
    cd05758
    Location:415 → 512
    IgI_5_KIRREL3-like; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
Nucleotide Protein
Heading Accession and Version

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