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CDH13 cadherin 13 [ Bufo gargarizans (Asiatic toad) ]

Gene ID: 122920483, updated on 22-Mar-2024

Summary

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Gene symbol
CDH13
Gene description
cadherin 13
See related
EnsemblRapid:ENSBGGG00000021002
Gene type
protein coding
RefSeq status
MODEL
Organism
Bufo gargarizans
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Hyloidea; Bufonidae; Bufo
Orthologs
human mouse all
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Genomic context

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See CDH13 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM1485885v1 (GCF_014858855.1) 10 NC_058089.1 (120244265..120502525, complement)

Chromosome 10 - NC_058089.1Genomic Context describing neighboring genes Neighboring gene DNA topoisomerase I, mitochondrial-like Neighboring gene malonyl-CoA decarboxylase Neighboring gene uncharacterized LOC122920484 Neighboring gene GABA type A receptor associated protein like 2 Neighboring gene transmembrane protein 231

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058089.1 Chromosome 10 Reference ASM1485885v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in adherens junction organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sprouting angiogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of catenin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cadherin-13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bufo gargarizans Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1485885v1 Primary Assembly

Genomic

  1. NC_058089.1 Reference ASM1485885v1 Primary Assembly

    Range
    120244265..120502525 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044270012.1 → XP_044125947.1  cadherin-13

    Related
    ENSBGGP00000028866.1, ENSBGGT00000031305.1
    Conserved Domains (2) summary
    cd11304
    Location:248 → 348
    Cadherin_repeat; Cadherin tandem repeat domain
    cl29226
    Location:371 → 445
    Cadherin; Cadherin domain
Nucleotide Protein
Heading Accession and Version

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