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PYGM glycogen phosphorylase, muscle associated [ Bufo gargarizans (Asiatic toad) ]

Gene ID: 122920334, updated on 22-Mar-2024

Summary

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Gene symbol
PYGM
Gene description
glycogen phosphorylase, muscle associated
See related
EnsemblRapid:ENSBGGG00000021210
Gene type
protein coding
RefSeq status
MODEL
Organism
Bufo gargarizans
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Hyloidea; Bufonidae; Bufo
Orthologs
human mouse all
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Genomic context

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See PYGM in Genome Data Viewer
Location:
chromosome: 10
Exon count:
20
Annotation release Status Assembly Chr Location
100 current ASM1485885v1 (GCF_014858855.1) 10 NC_058089.1 (76299309..76380310, complement)

Chromosome 10 - NC_058089.1Genomic Context describing neighboring genes Neighboring gene neurexin 2 Neighboring gene RAS guanyl releasing protein 2 Neighboring gene splicing factor 1 Neighboring gene menin 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058089.1 Chromosome 10 Reference ASM1485885v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycogen phosphorylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogen phosphorylase, muscle form

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bufo gargarizans Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1485885v1 Primary Assembly

Genomic

  1. NC_058089.1 Reference ASM1485885v1 Primary Assembly

    Range
    76299309..76380310 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044269762.1 → XP_044125697.1  glycogen phosphorylase, muscle form

    Related
    ENSBGGP00000029132.1, ENSBGGT00000031572.1
    Conserved Domains (1) summary
    cd04300
    Location:29 → 828
    GT35_Glycogen_Phosphorylase; glycogen phosphorylase and similar proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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