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PNPLA7 patatin like phospholipase domain containing 7 [ Bufo gargarizans (Asiatic toad) ]

Gene ID: 122919934, updated on 22-Mar-2024

Summary

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Gene symbol
PNPLA7
Gene description
patatin like phospholipase domain containing 7
See related
EnsemblRapid:ENSBGGG00000023238
Gene type
protein coding
RefSeq status
MODEL
Organism
Bufo gargarizans
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Hyloidea; Bufonidae; Bufo
Orthologs
human mouse all
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Genomic context

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See PNPLA7 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
36
Annotation release Status Assembly Chr Location
100 current ASM1485885v1 (GCF_014858855.1) 9 NC_058088.1 (190057328..190186461)

Chromosome 9 - NC_058088.1Genomic Context describing neighboring genes Neighboring gene diphthamide biosynthesis 7 Neighboring gene mitochondrial ribosomal protein L41 Neighboring gene 60S ribosomal protein L13a-like Neighboring gene NMDA receptor synaptonuclear signaling and neuronal migration factor Neighboring gene ectonucleoside triphosphate diphosphohydrolase 8-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058088.1 Chromosome 9 Reference ASM1485885v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lysophospholipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
patatin-like phospholipase domain-containing protein 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bufo gargarizans Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1485885v1 Primary Assembly

Genomic

  1. NC_058088.1 Reference ASM1485885v1 Primary Assembly

    Range
    190057328..190186461
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044269148.1 → XP_044125083.1  patatin-like phospholipase domain-containing protein 7

    Related
    ENSBGGP00000032707.1, ENSBGGT00000035175.1
    Conserved Domains (2) summary
    cd07225
    Location:937 → 1242
    Pat_PNPLA6_PNPLA7; Patatin-like phospholipase domain containing protein 6 and protein 7
    cd00038
    Location:606 → 714
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
Nucleotide Protein
Heading Accession and Version

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